BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035C04SP1|AL430020
(922 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1538 1804 0.0
>3x_Contig1538
Length = 9120
Score = 1804 bits (906), Expect = 0.0
Identities = 915/922 (99%)
Strand = Plus / Minus
Query: 1 gatccttcagcaaccgttccaactccagatttccaatctatggttaccttgcctctagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5021 gatccttcagcaaccgttccaactccagatttccaatctatggttaccttgcctctagag 4962
Query: 61 ccatctgaaattgaatggacattaagaaagtagaaagtttctgtgttccactcctgtcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4961 ccatctgaaattgaatggacattaagaaagtagaaagtttctgtgttccactcctgtcat 4902
Query: 121 acactgatttcttcattgttcttagacaataaccaattgttgggggagtaatcacgcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4901 acactgatttcttcattgttcttagacaataaccaattgttgggggagtaatcacgcaag 4842
Query: 181 aacaatatttacaccactcattcagtatccttctttttttgatagcatgcgatacgactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4841 aacaatatttacaccactcattcagtatccttctttttttgatagcatgcgatacgactg 4782
Query: 241 atattctattcattgtcccattttcctcggtaatttcaattctatctccgtctgatgtga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4781 atattctattcattgtcccattttcctcggtaatttcaattctatctccgtctgatgtga 4722
Query: 301 tacttcatcatttggrtctttcaaatacatattaatcatcgccgtttcgtgagtrgccga 360
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4721 tacttcatcatttggatctttcaaatacatattaatcatcgccgtttcgtgagtagccga 4662
Query: 361 acgctatgataataaaactgtccattagtttgtcgaatatgtaaaatttataaattatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4661 acgctatgataataaaactgtccattagtttgtcgaatatgtaaaatttataaattatat 4602
Query: 421 ttrrrgttgtttgcttagatcaaatattacgcagaaaatatacctcataccacaaaaccg 480
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4601 ttaaagttgtttgcttagatcaaatattacgcagaaaatatacctcataccacaaaaccg 4542
Query: 481 atgtatttagatcaattaacaagctcttttggrattgggaccgatttctgcagtgatgac 540
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4541 atgtatttagatcaattaacaagctcttttggaattgggaccgatttctgcagtgatgac 4482
Query: 541 ggaatctgtaacaggtccttctctcggacgttttgttgatgctgctaggtttgggtcgat 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4481 ggaatctgtaacaggtccttctctcggacgttttgttgatgctgctaggtttggatcgat 4422
Query: 601 actatgctcggatatacgtccgtcttcagattcgttgggtgttgaagcactatcagcctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4421 actatgctcggatatacgtccgtcttcagattcgttgggtgttgaagcactatcagcctt 4362
Query: 661 attcacatcaggagtctcggatattggggtgactgtcgaagcaggtagtacatgttcctt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4361 attcacatcaggagtctcggatattggggtgactgtcgaagcaggtagtacatgttcctt 4302
Query: 721 cgccatgttttcttttaggatatcaacagcagtattaacaccattgtcaatttcaatctt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4301 cgccatgttttcttttaggatatcaacagcagtattaacaccattgtcaatttcaatctt 4242
Query: 781 ttgttgcttcctcttttttggtttagtgtaattttttgcttcttctatgatgtcgtgttc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4241 ttgttgcttcctcttttttggtttagtgtaattttttgcttcttctatgatgtcgtgttc 4182
Query: 841 tatggaccttgcaatttctaacttttctaatgataccgctatgatgtttaagagttcctt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4181 tatggaccttgcaatttctaacttttctaatgataccgctatgatgtttaagagttcctt 4122
Query: 901 gtcgctcaccataactgcagca 922
||||||||||||||||||||||
Sbjct: 4121 gtcgctcaccataactgcagca 4100
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7212
Number of Sequences: 1807
Number of extensions: 7212
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 922
length of database: 10,358,551
effective HSP length: 16
effective length of query: 906
effective length of database: 10,329,639
effective search space: 9358652934
effective search space used: 9358652934
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)